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Your microscopy images, centralized and shared

A scientific image management platform powered by OMERO, installed and maintained by DINAO. Centralize, annotate and share your microscopy data — on French servers, GDPR compliant.

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Hosted in France150 image formatsSharing & collaborationGDPR compliantOfficial publisher image
Overview

What is OMERO?

OMERO (OME Remote Objects) is the open source microscopy image management platform developed by the Open Microscopy Environment (OME) consortium. It allows you to import, store, organize, visualize and share scientific images and their metadata, regardless of their source, from a central server accessible via the web or dedicated clients.

Thanks to the Bio-Formats library, OMERO reads over 150 proprietary formats (Zeiss .czi, Leica .lif…) and makes them interoperable through open standards such as OME-TIFF and OME-Zarr. Images are organized into projects, datasets and screens, with indexed and searchable tags, annotations, regions of interest and measurements.

The ecosystem includes powerful clients and modules: OMERO.web for navigation, OMERO.iviewer for multidimensional visualization, OMERO.figure for composing publication figures, as well as a Python API and integrations with ImageJ/Fiji, QuPath and CellProfiler. OMERO manages groups, roles and fine-grained permissions, ideal for shared imaging platforms.

Compatible offers

Host OMERO at DINAO

Resource tiers compatible with OMERO prerequisites (minimum 2 vCPU / 4096 Mo / 30 Go). Hosted in France, fully managed.

Standard
2 vCPU · 4 Go · 40 Go
19,90 € /month excl. VAT
  • 2 dedicated vCPU
  • 4 Go RAM
  • 40 GB NVMe
  • Daily backups
  • Managed & monitored by DINAO
Order
Performance
4 vCPU · 8 Go · 80 Go
39,90 € /month excl. VAT
  • 4 dedicated vCPU
  • 8 Go RAM
  • 80 GB NVMe
  • Daily backups
  • Managed & monitored by DINAO
Order
★ Recommended for this app
Dédié
8 vCPU · 16 Go · 160 Go
79,90 € /month excl. VAT
  • 8 dedicated vCPU
  • 16 Go RAM
  • 160 GB NVMe
  • Daily backups
  • Managed & monitored by DINAO
Order

1 hidden tier(s) (insufficient resources for this app) : Découverte

Under the hood

Technical details

vCPU
2 vCPU
ideal : 4 vCPU
Memory
4096 Mo
ideal : 8192 Mo
Disk
30 Go
ideal : 100 Go
Image : docker.io/openmicroscopy/omero-server:5 Registry : docker.io Services : database, omeroserver, omeroweb Ports : 4063/tcp, 4064/tcp, 4080/tcp
FAQ

You might be wondering…

What image formats does OMERO support?

Thanks to Bio-Formats, OMERO reads over 150 proprietary microscopy formats (Zeiss .czi, Leica .lif, Nikon, Olympus…) and exposes them in open formats such as OME-TIFF and OME-Zarr, without manual conversion.

Can I connect ImageJ, Fiji or QuPath?

Yes. OMERO has plugins and a Python API that allow you to access images from ImageJ/Fiji, QuPath, CellProfiler and your own analysis scripts, without duplicating files.

How do I share images with my colleagues?

OMERO manages groups and fine-grained permissions. You share projects and datasets within your team, or generate public read-only links to accompany a scientific publication.

Where are my scientific data hosted?

On DINAO's infrastructure in France, in one of the available data centers. Your images and metadata do not leave the territory, in compliance with GDPR.

Is storage scalable?

Yes. The image volume starts according to your plan and scales on demand as your acquisitions grow, without migration or service interruption.